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open2c/polychrom #79: 11/11 pairs agree

11/11 test pairs agree with the fix, 1/11 on master. pytest 65/65, up from 64/64. Mismatched frees: 16 to 0.

  • 11/11 pairs agree
  • C++, Python polymer simulation

getLinkingNumber returned the Gauss linking number of linked DNA rings with the wrong sign. The fix makes it come out with the right sign, and it fixes a free/delete[] leak.